Sophos kagathos
2011
◦ Defoin-Platel M., Hindle M., Baudo M., Powers S., Mitchel R., Saqi M., Habash D. (2011) Networks of water stress response across Durum wheat cultivars. In preparation
◦ Defoin-Platel M., Brown J. W., van Tuinen M., ..., Kimball R. T. , Drummond A. J., Clarke J. A. and Braun E.L. (2011) A Phylogenomic Perspective on Avian Macroevolution. In preparation
◦ Defoin-Platel M., Li S, Drummond A. J. (2011) Phylogenetic inference with relaxed molecular clock models. In preparation
◦ Defoin-Platel M., Hassani-Pak K., Rawlings C.J. (2011) Gaining confidence in cross-species annotation transfer : from simple molecular function to complex phenotypical traits. In revision
2010
◦ Hindle M., Powers S., Habash D., Saqi M., Defoin-Platel M. (2010) AIGO : Toward a unified framework for the Analysis and the Inter-comparison of GO functional annotations. BMC BioInformatics. In revision
◦ Lysenko A., Defoin-Platel M., Hassani-Pak K., Taubert J., Hodgman C. T., Rawlings C. J. and Saqi M. (2010) Assessing the functional coherence of modules found in multiple-evidence networks from Arabidopsis. BMC BioInformatics. In revision
◦ Smeraldi F., Defoin Platel M., Saqi M. (2010) Handling missing features with boosting algorithms for protein-protein
interaction prediction. In proceedings of the 7th International Conference on Data Integration in the Life Sciences (DILS
2010). DILS’2010 :132-147
◦ Swarbreck M. S., Defoin-Platel M., Hindle M., Saqi M., and Habash D. Z. (2010) New perspectives on glutamine synthetase in grasses. Journal of Experimental Botany. In press
◦ Schliebs S., Defoin Platel M., Kasabov N. (2010) Analyzing the Dynamics of the Simultaneous Feature and Parameter Optimization of an Evolving Spiking Neural Network. In proceedings of the IEEE International Joint Conference on Neural Networks. In press
2009
◦ Benuskova L., Defoin Platel M., Schliebs S., Jain V. and Kasabov N. (2009) Discovering patterns of interaction between genes related to normal and impaired learning and memory during LTP : A computational modelling approach. Cognitive Neurodynamics. Submitted
◦ Schliebs S., Kasabov N., Defoin-Platel M. (2009) On the Probabilistic Optimization of Spiking Neural Networks. International Journal of Neural Systems. 20(6), 481-500
◦ Schliebs S., Defoin Platel M., Worner S., Kasabov N. (2009) Integrated Feature and Parameter Optimization for an Evolving Spiking Neural Network : Exploring heterogeneous probabilistic models. Neural Networks. 22, 623-632
◦ Schliebs S., Defoin Platel M., Worner S., Kasabov N. (2009) Quantum-inspired feature and parameter optimisation of evolving spiking neural networks with a case study from ecological modeling Neural Networks. In proceedings of the IEEE International Joint Conference on Neural Networks. 2833-2840
2008
◦ Hoena S., Defoin Platel M., Drummond A. J. (2008) Clock-constrained Tree Proposal Operators in Bayesian Phylogenetic Inference. In Proceedings of the IEEE Conference on BioInformatics and BioEngineering. 1-7
◦ Defoin Platel M., Schliebs S., Kasabov N. (2008) Quantum-inspired Evolutionary Algorithm : A multimodel Estimation of Distribution Algorithm. IEEE Transaction on Evolutionary Computation. 13(6), 1218-1232
2007
◦ Defoin Platel M., Schliebs S., Kasabov N. (2007) A Versatile Quantum-inspired Evolutionary Algorithm. In Proceedings of the IEEE International Congress on Evolutionary Computation. CEC’07 :423-430
◦ Schliebs S., Defoin Platel M., Kasabov N. (2007) Quantum-inspired feature selection and neural network models for time series prediction. In proceedings of the IEEE International Joint Conference on Neural Networks IJCNN :NN3
competition
◦ Defoin Platel M., Verel S., Clergue M. and Chami M. (2007) Density Estimation with Genetic Programming for Inverse Problem Solving. Lecture Notes in Computer Sciences. 4445 :45-54
◦ Chami M., Defoin Platel M., Antoine D. (2007) Sensitivity of the retrieval of the inherent optical properties of marine particles in coastal waters to the directional variations and the polarization of the reflectance. Journal
of Geophysical Research. 112 :C05037.
2006
◦ Chami M., Defoin Platel M. (2006) Influence of the underwater light polarization on the characterization of the optical properties of marine particles Ocean Optics XVIII - The Oceanography Society. In proceedings
◦ Defoin Platel M., Chami M. (2006) Ambiguities in the inversion of the Ocean Colour : Problems and Solutions. SIRC 2006 - The 18th Annual Colloquium of the Spatial Information Research Centre. 18 :33-42
◦ Simoncini David, Defoin Platel M. (2006) Spatial anisotropy encourages parapatric speciation in Evolutionary Algorithms. SIRC 2006 - The 18th Annual Colloquium of the Spatial Information Research Centre. 18 :43-50
◦ Defoin Platel M., Clergue M. (2006) Monitoring genetic variations in Variable Length Evolutionary Algorithms. In Proceedings of the IEEE International Conference Hybrid Intelligent Systems 2006. 4-11
◦ Defoin Platel M., Chami M. (2006) How ambiguous is the inverse problem of Ocean Colour in coastal waters ?. Journal of Geophysical Research. 112 :C03004
2005
◦ Defoin Platel M., Clergue M., Collard P. (2005) Size Control with Maximum Homologous Crossover. Lecture Notes in Computer Sciences. 3871 :13-24
◦ Defoin Platel M., Clergue M., Collard P. (2005) Teams of Genetic Predictors for inverse problem solving. Lecture Notes in Computer Sciences. 3447 :341-350
◦ Chami M., Defoin Platel M., Antoine D. (2005) Operational retrieval of aerosol refractive index from ground based measurements of sky radiance and degree of polarization with a neural network approach. Applied Optics.
2004 and before
◦ Defoin Platel M., Clergue M., Collard P. (2004) From Royal Road to Epistatic Road for Variable Length Evolutionary Algorithms. Lecture Notes in Computer Sciences. 2936 :3-14
◦ Defoin Platel M., Clergue M., Collard P. (2003) Homology Gives Size Control in Genetic Programming. In Proceedings of the IEEE International Congress on Evolutionary Computation. CEC’03 :281-288.
◦ Defoin Platel M., Clergue M., Collard P. (2003) Maximum Homologous Crossover for Linear Genetic Programming. Lecture Notes in Computer Sciences. 2610 :194-203
◦ Collard P., Clergue M., Defoin Platel M. (2000) Synthetic Neutrality for Artificial Evolution. Lecture Notes in Computer Sciences. 1829 :254-265
◦ Fouchal H., Defoin Platel M., Bloch S., Moreaux P., Petitjean E. (1998) Generation of timed automata from ESTELLE specifications. In Proceedings of the International Workshop on the Formal Technique ESTELLE 225-236
